CDS

Accession Number TCMCG017C23762
gbkey CDS
Protein Id OMO75411.1
Location join(110790..110914,111018..111145,111269..111377,111476..111557,111666..111736,111844..111885,111980..112104,112238..112331,112558..112660,112735..112913,112992..113097,114760..114807,115194..115377,115486..115539,115631..115716,115866..115954,116036..116090,116171..116223,116309..116359,116446..116494,116588..116653,116735..116811,116931..117048,117189..117241,118407..118499,118837..118902,119370..119583,119661..120015,120145..120263)
GeneID InterPro:IPR003316
Organism Corchorus olitorius
locus_tag COLO4_26158

Protein

Length 997aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215141, BioSample:SAMN03160584
db_source AWUE01019210.1
Definition hypothetical protein COLO4_26158 [Corchorus olitorius]
Locus_tag COLO4_26158

EGGNOG-MAPPER Annotation

COG_category J
Description tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03016        [VIEW IN KEGG]
KEGG_ko ko:K03256        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0001510        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006399        [VIEW IN EMBL-EBI]
GO:0006400        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008033        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009451        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0030488        [VIEW IN EMBL-EBI]
GO:0031515        [VIEW IN EMBL-EBI]
GO:0032259        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034470        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034660        [VIEW IN EMBL-EBI]
GO:0034708        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0043414        [VIEW IN EMBL-EBI]
GO:0043527        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1902494        [VIEW IN EMBL-EBI]
GO:1990234        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTCTGAAAGTAAACCCCAATTGGGTCCTGTTCAAAATCCTAGAGTAACCTGGGAAGGTTGCAGCGTATTGCTCGACATCAACGACGGTGATCGACTTGTTTTCGCCCGACTCTCTGCCGGCTCGACGTTGAAAATTGGGAATAAAACATGCTCTTTGCAACCGTTGATTGGATGTCCCTTTGGTTCTATGTTTCAAGTTGAAAGTGGACAGGAAAAGCCTTACCTTTCCCGCTTTACTCCCTCCACAGAAGAGAATAATGTTCAAGATGAAGGGAAAGAAGAATCCCGAGATAATAGAGCACTAATTGATAATAACCAAGCTCAAAGCCTCACCAGTGAAGATATAGATGCATTGCGGAGACAAGGGGCAACAGGAAATGAAATTGTTGAGGCTCTCATTGCCAACAGTACGACATTTGACAAGAAAACACAATTCTCACAGGAGAAATATAGGATTAAAAAGCAGAAGAAATATGCACCCAGAGTACTTCTAAGGCGTCCCTTTTCTCGAAGTATATGTGAGGCATACTTCAAGAAATATCCAGCTCGAATTGGATTTTTGCGAGTGGATGCTTTATCTCTGTTGCTTTCAATGGCTAACGTTACAGCAAACTCAGATGTACTTGTAGTGGATTTTGTTGGTGGACTTCTTACCGGTGCTGTGGCAGAGCGTTTAGGAGGTACAGGTAGCGTGTGCAATACTTATCTTGGAGGCAAACCCCATTCTATGGAGATAATAAGGATGTTCAACTTTACTAATGAAATTTGCAAGAGAGTCTTGCGGTGTTCACTTGATGACCTTTGTTCAGTCCAAAGTGGAACTGATGAGAAAGCCGATCAACAAGAAAATGTCCGTACGGTGGAGATTCGATCTAATGAGCAAACATCTGTATCAGTTAGCATGGAAGAGGTTGATCTTTCAACAGACAATGGTGTTGGGGATCTTCTTCCTGAGAATGATCTTTCTACAGTAAGCAAAACTTGCAAAGCCCCAAAAGCTGGAGACAAGGCATCAAAAGAATCCATGAAGTCGTGGAGAGAAAATGGTTTCTCAAGCCTAATTATTGCTGCACCGGAGCAGGACCCTTGGAGCTTAGTTAAGCAGTTGCTGCCCCTCCTATCATACTCAGCTCCTTTTGCAATCTATCACCAGTATCTGCAGTCTAATTCTAGTCTCGACTCCGCCCACTCTGCCTTTGCTACTCCGCCGCTGAATCAAACAAGAGAAGGAAAGAGTGTTGAGGCTCAGTCAAGTGGAAGACAAGATGTTCCCGGACATGGCAAAGTTATTAACCATCCTTTGCCGGGACCAGAGCATGAGAAAGGTGGTAAGCATAATAGCAAAGCAAAGGGGAAGAAGAATTCCAAGTCCGGAACTCAGAAATTGGATGCTGACTCTCCCAATGGACTCAATACAACCGGTAACTGTCGATATGACAGTTCTTTAGGCTTGTTGACAAAGAAGTTTGTGAACTTGATCATGGAGGCTAAGGACGGTACCCTTGATTTGAACCATACTGCAGAAGTATTAGAGGTGCAAAAGAGAAGGATATATGATATCACGAATGTTCTTGAAGGAATTGGATTAATAGAGAAAACTTCAAAGAATCACATACGCTGGAAAGGATCAGACGATAAGGCGTCAATGGAGCTCGACGATCAAGTTACAAGATTAAAGGCTGAGGTTCAGAGGTTATATGCTGAAGAATGCAAGCTTGATAATCACATAAGGGAAAGGCAAGAGAGTCTGAGGGCTTTGGATGAAGATGCAAATAAACAACAGTACCTTTTTATGACAGAGGAAGATATAATGAACCTTCCATGCTTCCAGAATCAAACAGTTATTTCAATTGAAGCTCCTCAAGCATCTTATATTGAAGTTCCTGATCCTGATGAGGATATTGGTTTTCAACAAAGGCAATATAAAATGATTATTAGAAGTCATAATGGGCCAATTATTCTGCATCTCCTAAGCCAATATCAAGATCGTGTTAATGGTTTATCTGGAGTGCAACCTCCAGAGCTGTGTTCGGACGACAAAGCTAGTCAAATGAATTCTTCTAAAACCGAGTTAACTCCTTCAATGGGTGCCGTTGATGATGATTATTGGTTTCACTCAGAACCTGGAGTCAGCATGACAGACTTGGTTTACGAAGAACTGTTAACAATCTCTTCTCATTTCATTCACATTTTCTTTAAACAGTATCAATCCGGGTTTCCTGAAAATTGCGGAGTTAGGGTGCCATTAGCTGACAAATACAATCATATGCACTGGCCAGGGAAATCAATTGTGATTAACTCAAGACCAAACAATGTATTTGACAAGAAAACCTGGAATAACATAAGGGATGAATTTAACAAGCAAACAGAGCTCAACTTCAATAATAATCAGTTGAGAAAGCACCTGGATGTTCTGCGAACACGCTTCTATAACCTGAAATCAGCTTATGATCAAAACGATTTTGCAGGCATGGAGGACTCTTGTTGCATTGGGTTTGACCTGTGGGAAGATATTGGGGCACAGCCTAGGCCTGAGCCAGTCAAAGTCAAGGACTGCCCCATATATGAGCAACTATGCGCAATATTCACTGATTCATCTGCTGATGGGAAGTATGCCCAATCAAGCCACTTTGAAGGGTTGGATAAAGCTATTGGAAACGATAATGGTGGCTTAAATTCATGTCCAGAGGGAGGATCCGCACAACCTGATAATTCATCAGCCTCAAGATTACCACAAAACAATTCATTGCCAGAAAAGTTGACTAAGACCACCGGGGAGAGAAAAAGAAAACGACCTTCTGAGGCACAATCTTCTTTGGATCAGAGCAGAAAAGATGAAGAAACATCTGAGGCTATGGCAGGAGCCATGTTTGCTCTAGACCTATTTGAAGACTCCAACTTGAGGGAAACCTTTATCTGTCTGAAAGGTGGGACGACAAGGCTGACATGGTTGCAAGGGAAGTGTGTGAGTCCTGCGCTGACCTCCTTCTAA
Protein:  
MSESKPQLGPVQNPRVTWEGCSVLLDINDGDRLVFARLSAGSTLKIGNKTCSLQPLIGCPFGSMFQVESGQEKPYLSRFTPSTEENNVQDEGKEESRDNRALIDNNQAQSLTSEDIDALRRQGATGNEIVEALIANSTTFDKKTQFSQEKYRIKKQKKYAPRVLLRRPFSRSICEAYFKKYPARIGFLRVDALSLLLSMANVTANSDVLVVDFVGGLLTGAVAERLGGTGSVCNTYLGGKPHSMEIIRMFNFTNEICKRVLRCSLDDLCSVQSGTDEKADQQENVRTVEIRSNEQTSVSVSMEEVDLSTDNGVGDLLPENDLSTVSKTCKAPKAGDKASKESMKSWRENGFSSLIIAAPEQDPWSLVKQLLPLLSYSAPFAIYHQYLQSNSSLDSAHSAFATPPLNQTREGKSVEAQSSGRQDVPGHGKVINHPLPGPEHEKGGKHNSKAKGKKNSKSGTQKLDADSPNGLNTTGNCRYDSSLGLLTKKFVNLIMEAKDGTLDLNHTAEVLEVQKRRIYDITNVLEGIGLIEKTSKNHIRWKGSDDKASMELDDQVTRLKAEVQRLYAEECKLDNHIRERQESLRALDEDANKQQYLFMTEEDIMNLPCFQNQTVISIEAPQASYIEVPDPDEDIGFQQRQYKMIIRSHNGPIILHLLSQYQDRVNGLSGVQPPELCSDDKASQMNSSKTELTPSMGAVDDDYWFHSEPGVSMTDLVYEELLTISSHFIHIFFKQYQSGFPENCGVRVPLADKYNHMHWPGKSIVINSRPNNVFDKKTWNNIRDEFNKQTELNFNNNQLRKHLDVLRTRFYNLKSAYDQNDFAGMEDSCCIGFDLWEDIGAQPRPEPVKVKDCPIYEQLCAIFTDSSADGKYAQSSHFEGLDKAIGNDNGGLNSCPEGGSAQPDNSSASRLPQNNSLPEKLTKTTGERKRKRPSEAQSSLDQSRKDEETSEAMAGAMFALDLFEDSNLRETFICLKGGTTRLTWLQGKCVSPALTSF